Abreu-Goodger, C.: search on Z-Library

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1

Transcriptome diversity among rice root types during asymbiosis and interaction with arbuscular mycorrhizal fungi

Gutjahr, Caroline, Sawers, Ruairidh J. H., Marti, Guillaume, Andrés-Hernández, Liliana, Yang, Shu-Yi, Casieri, Leonardo, Angliker, Herbert, Oakeley, Edward J., Wolfender, Jean-Luc, Abreu-Goodger, Cei,

Journal:

Proceedings of the National Academy of Sciences

Year:

2015

Language:

english

File:

PDF, 1.07 MB

english, 2015

2

The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements

De Fazio, Serena, Bartonicek, Nenad, Di Giacomo, Monica, Abreu-Goodger, Cei, Sankar, Aditya, Funaya, Charlotta, Antony, Claude, Moreira, Pedro N., Enright, Anton J., O’Carroll, Dónal

Journal:

Year:

2011

Language:

english

File:

PDF, 2.61 MB

english, 2011

3

GeConT: gene context analysis

Ciria, R., Abreu-Goodger, C., Morett, E., Merino, E.

Journal:

Year:

2004

Language:

english

File:

PDF, 52 KB

english, 2004

4

Sex determination and differentiation genes in a functional hermaphrodite scallop, Nodipecten subnodosus

Galindo-Torres, Pavel, García-Gasca, Alejandra, Llera-Herrera, Raúl, Escobedo-Fregoso, Cristina, Abreu-Goodger, Cei, Ibarra, Ana M.

Journal:

Marine Genomics

Year:

2017

Language:

english

File:

PDF, 2.49 MB

english, 2017

5

Erratum: Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity

Buck, Amy H., Coakley, Gillian, Simbari, Fabio, McSorley, Henry J., Quintana, Juan F., Le Bihan, Thierry, Kumar, Sujai, Abreu-Goodger, Cei, Lear, Marissa, Harcus, Yvonne, Ceroni, Alessandro, Babayan,

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 134 KB

english, 2015

6

Annotating and quantifying pri-miRNA transcripts using RNA-Seq data of wild type and serrate-1 globular stage embryos of Arabidopsis thaliana

Lepe-Soltero, Daniel, Armenta-Medina, Alma, Xiang, Daoquan, Datla, Raju, Gillmor, C. Stewart, Abreu-Goodger, Cei

Journal:

Year:

2017

Language:

english

File:

PDF, 300 KB

english, 2017

7

Kraken: A set of tools for quality control and analysis of high-throughput sequence data

Davis, Matthew P.A., van Dongen, Stijn, Abreu-Goodger, Cei, Bartonicek, Nenad, Enright, Anton J.

Journal:

Year:

2013

Language:

english

File:

PDF, 738 KB

english, 2013

8

GeConT 2: gene context analysis for orthologous proteins, conserved domains and metabolic pathways

Martinez-Guerrero, C. E., Ciria, R., Abreu-Goodger, C., Moreno-Hagelsieb, G., Merino, E.

Journal:

Nucleic Acids Research

Year:

2008

Language:

english

File:

PDF, 6.47 MB

english, 2008

9

Improving microRNA target prediction with gene expression profiles

Ovando-Vázquez, Cesaré, Lepe-Soltero, Daniel, Abreu-Goodger, Cei

Journal:

Year:

2016

Language:

english

File:

PDF, 994 KB

english, 2016

10

The RNAi machinery regulates growth and development in the filamentous fungus Trichoderma atroviride

Carreras-Villaseñor, Nohemi, Esquivel-Naranjo, Edgardo U., Villalobos-Escobedo, J. Manuel, Abreu-Goodger, Cei, Herrera-Estrella, Alfredo

Journal:

Molecular Microbiology

Year:

2013

Language:

english

File:

PDF, 2.99 MB

english, 2013

11

The miR-144/451 locus is required for erythroid homeostasis

Rasmussen, K. D., Simmini, S., Abreu-Goodger, C., Bartonicek, N., Di Giacomo, M., Bilbao-Cortes, D., Horos, R., Von Lindern, M., Enright, A. J., O'Carroll, D.

Journal:

Journal of Experimental Medicine

Year:

2010

Language:

english

File:

PDF, 5.49 MB

english, 2010

12

Theoretical and empirical quality assessment of transcription factor-binding motifs

Medina-Rivera, A., Abreu-Goodger, C., Thomas-Chollier, M., Salgado, H., Collado-Vides, J., van Helden, J.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 1.91 MB

english, 2011

13

Diminished Redundancy of Outer Membrane Factor Proteins in Rhizobiales: A nodT Homolog Is Essential for Free-Living Rhizobium etli

Hern&aacute, ndez-Mendoza, Armando, Nava, Noreide, Santana, Olivia, Abreu-Goodger, Cei, Tovar, Anibal, Quinto, Carmen

Journal:

Journal of Molecular Microbiology and Biotechnology

Year:

2007

Language:

english

File:

PDF, 485 KB

english, 2007

14

Post-developmental microRNA expression is required for normal physiology, and regulates aging in parallel to insulin/IGF-1 signaling in C. elegans

Lehrbach, N. J., Castro, C., Murfitt, K. J., Abreu-Goodger, C., Griffin, J. L., Miska, E. A.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.71 MB

english, 2012

15

Identification of Male Gametogenesis Expressed Genes from the Scallop Nodipecten subnodosus by Suppressive Subtraction Hybridization and Pyrosequencing

Llera-Herrera, Raúl, García-Gasca, Alejandra, Abreu-Goodger, Cei, Huvet, Arnaud, Ibarra, Ana M., Planas, Josep V.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.03 MB

english, 2013

16

microRNA-22 Promotes Heart Failure through Coordinate Suppression of PPAR/ERR-Nuclear Hormone Receptor Transcription

Gurha, Priyatansh, Wang, Tiannan, Larimore, Ashley H., Sassi, Yassine, Abreu-Goodger, Cei, Ramirez, Maricela O., Reddy, Anilkumar K., Engelhardt, Stefan, Taffet, George E., Wehrens, Xander H. T., Entm

Journal:

Year:

2013

Language:

english

File:

PDF, 1.23 MB

english, 2013

17

Malignant Germ Cell Tumors Display Common MicroRNA Profiles Resulting in Global Changes in Expression of Messenger RNA Targets

Palmer, R. D., Murray, M. J., Saini, H. K., van Dongen, S., Abreu-Goodger, C., Muralidhar, B., Pett, M. R., Thornton, C. M., Nicholson, J. C., Enright, A. J., Coleman, N.

Journal:

Cancer Research

Year:

2010

Language:

english

File:

PDF, 1.56 MB

english, 2010

18

A Complete Set of Flagellar Genes Acquired by Horizontal Transfer Coexists with the Endogenous Flagellar System in Rhodobacter sphaeroides

Poggio, S., Abreu-Goodger, C., Fabela, S., Osorio, A., Dreyfus, G., Vinuesa, P., Camarena, L.

Journal:

Journal of Bacteriology

Year:

2007

Language:

english

File:

PDF, 614 KB

english, 2007

19

Enhanced Susceptibility to Citrobacter rodentium Infection in MicroRNA-155-Deficient Mice

Clare, S., John, V., Walker, A. W., Hill, J. L., Abreu-Goodger, C., Hale, C., Goulding, D., Lawley, T. D., Mastroeni, P., Frankel, G., Enright, A. J., Vigorito, E., Dougan, G.

Journal:

Infection and Immunity

Year:

2013

Language:

english

File:

PDF, 1.57 MB

english, 2013

20

microRNA-155 Regulates the Generation of Immunoglobulin Class-Switched Plasma Cells

Elena Vigorito, Kerry L. Perks, Cei Abreu-Goodger, Sam Bunting, Zou Xiang, Susan Kohlhaas, Partha P. Das, Eric A. Miska, Antony Rodriguez, Allan Bradley, Kenneth G.C. Smith, Cristina Rada, Anton J. En

Journal:

Year:

2007

Language:

english

File:

PDF, 1.20 MB

english, 2007

21

Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity

Buck, Amy H., Coakley, Gillian, Simbari, Fabio, McSorley, Henry J., Quintana, Juan F., Le Bihan, Thierry, Kumar, Sujai, Abreu-Goodger, Cei, Lear, Marissa, Harcus, Yvonne, Ceroni, Alessandro, Babayan,

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 3.21 MB

english, 2014

22

Zebrafish miR-1 and miR-133 shape muscle gene expression and regulate sarcomeric actin organization

Mishima, Y., Abreu-Goodger, C., Staton, A. A., Stahlhut, C., Shou, C., Cheng, C., Gerstein, M., Enright, A. J., Giraldez, A. J.

Journal:

Genes & Development

Year:

2009

Language:

english

File:

PDF, 1.68 MB

english, 2009

23

The maize (Zea mays ssp. mays var. B73) genome encodes 33 members of the purple acid phosphatase family

GonzÃ¡lez-MuÃ±oz, EliÃ©cer, AvendaÃ±o-VÃ¡zquez, Aida-Odette, Montes, Ricardo A. ChÃ¡vez, de Folter, Stefan, AndrÃ©s-HernÃ¡ndez, Liliana, Abreu-Goodger, Cei, Sawers, Ruairidh J. H.

Journal:

Frontiers in Plant Science

Year:

2015

Language:

english

File:

PDF, 2.71 MB

english, 2015

24

The miR-155-PU.1 axis acts on Pax5 to enable efficient terminal B cell differentiation

Lu, D., Nakagawa, R., Lazzaro, S., Staudacher, P., Abreu-Goodger, C., Henley, T., Boiani, S., Leyland, R., Galloway, A., Andrews, S., Butcher, G., Nutt, S. L., Turner, M., Vigorito, E.

Journal:

Journal of Experimental Medicine

Year:

2014

Language:

english

File:

PDF, 3.15 MB

english, 2014

25

Efficient inhibition of miR-155 function in vivo by peptide nucleic acids

Fabani, M. M., Abreu-Goodger, C., Williams, D., Lyons, P. A., Torres, A. G., Smith, K. G. C., Enright, A. J., Gait, M. J., Vigorito, E.

Journal:

Nucleic Acids Research

Year:

2010

Language:

english

File:

PDF, 4.73 MB

english, 2010

26

Identification of miR-708-5p in peripheral blood monocytes: Potential marker for postmenopausal osteoporosis in Mexican-Mestizo population

De-La-Cruz-Montoya, Aldo H., Ramírez-Salazar, Eric G., Martínez-Aguilar, Mayeli M., González-de-la-Rosa, Pablo M., Quiterio, Manuel, Abreu-Goodger, Cei, Salmerón, Jorge, Velázquez-Cruz, Rafael

Journal:

Experimental Biology and Medicine

Year:

2018

Language:

english

File:

PDF, 597 KB

english, 2018

27

Conserved regulatory motifs in bacteria: riboswitches and beyond

Cei Abreu-Goodger, Nancy Ontiveros-Palacios, Ricardo Ciria, Enrique Merino

Journal:

Trends in Genetics

Year:

2004

Language:

english

File:

PDF, 154 KB

english, 2004

28

miR-124 acts through CoREST to control onset of Sema3A sensitivity in navigating retinal growth cones

Baudet, Marie-Laure, Zivraj, Krishna H, Abreu-Goodger, Cei, Muldal, Alistair, Armisen, Javier, Blenkiron, Cherie, Goldstein, Leonard D, Miska, Eric A, Holt, Christine E

Journal:

Nature Neuroscience

Year:

2011

Language:

english

File:

PDF, 2.33 MB

english, 2011

29

MiR-25 Regulates Wwp2 and Fbxw7 and Promotes Reprogramming of Mouse Fibroblast Cells to iPSCs

Lu, Dong, Davis, Matthew P. A., Abreu-Goodger, Cei, Wang, Wei, Campos, Lia S., Siede, Julia, Vigorito, Elena, Skarnes, William C., Dunham, Ian, Enright, Anton J., Liu, Pentao, Panepucci, Rodrigo Alexa

Journal:

Year:

2012

Language:

english

File:

PDF, 852 KB

english, 2012

30

Large-Scale Identification of MicroRNA Targets in Murine Dgcr8-Deficient Embryonic Stem Cell Lines

Davis, Matthew P. A., Abreu-Goodger, Cei, van Dongen, Stijn, Lu, Dong, Tate, Peri H., Bartonicek, Nenad, Kutter, Claudia, Liu, Pentao, Skarnes, William C., Enright, Anton J., Dunham, Ian, Panepucci, R

Journal:

Year:

2012

Language:

english

File:

PDF, 2.52 MB

english, 2012

31

Targeted Deletion of MicroRNA-22 Promotes Stress-Induced Cardiac Dilation and Contractile Dysfunction

Gurha, P., Abreu-Goodger, C., Wang, T., Ramirez, M. O., Drumond, A. L., van Dongen, S., Chen, Y., Bartonicek, N., Enright, A. J., Lee, B., Kelm, R. J., Reddy, A. K., Taffet, G. E., Bradley, A., Wehren

Journal:

Year:

2012

Language:

english

File:

PDF, 8.85 MB

english, 2012

32

Global Analyses of the Effect of Different Cellular Contexts on MicroRNA Targeting

Nam, Jin-Wu, Rissland, Olivia S., Koppstein, David, Abreu-Goodger, Cei, Jan, Calvin H., Agarwal, Vikram, Yildirim, Muhammed A., Rodriguez, Antony, Bartel, David P.

Journal:

Year:

2014

Language:

english

File:

PDF, 3.05 MB

english, 2014

33

Extent, Causes, and Consequences of Small RNA Expression Variation in Human Adipose Tissue

Parts, Leopold, Hedman, Åsa K., Keildson, Sarah, Knights, Andrew J., Abreu-Goodger, Cei, van de Bunt, Martijn, Guerra-Assunção, José Afonso, Bartonicek, Nenad, van Dongen, Stijn, Mägi, Reedik, Nisbet,

Journal:

Year:

2012

Language:

english

File:

PDF, 1.00 MB

english, 2012

34

Combined agonist–antagonist genome-wide functional screening identifies broadly active antiviral microRNAs

Diwakar Santhakumar, Thorsten Forster, Nouf N. Laqtom, Rennos Fragkoudis, Paul Dickinson, Cei Abreu-Goodger, Sergei A. Manakov, Nila Roy Choudhury, Samantha J. Griffiths, Annaleen Vermeulen, Anton J.

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.74 MB

english, 2010

35

Genome Evolution in Three Species of Cactophilic Drosophila

Sanchez-Flores, A., Penazola, F., Carpinteyro-Ponce, J., Nazario-Yepiz, N., Abreu-Goodger, C., Machado, C. A., Markow, T. A.

Journal:

G3 Genes|Genome|Genetics

Year:

2016

Language:

english

File:

PDF, 1.00 MB

english, 2016

36

High-Throughput Profiling of Caenorhabditis elegans Starvation-Responsive microRNAs

Garcia-Segura, Laura, Abreu-Goodger, Cei, Hernandez-Mendoza, Armando, Dimitrova Dinkova, Tzvetanka D., Padilla-Noriega, Luis, Perez-Andrade, Martha Elva, Miranda-Rios, Juan, Mukhopadhyay, Partha

Journal:

Year:

2015

Language:

english

File:

PDF, 1.72 MB

english, 2015

37

Disentangling sRNA-Seq data to study RNA communication between species

Bermúdez-Barrientos, José Roberto, Ramírez-Sánchez, Obed, Chow, Franklin Wang-Ngai, Buck, Amy H, Abreu-Goodger, Cei

Journal:

Nucleic Acids Research

Year:

2019

File:

PDF, 2.42 MB

2019

38

Messenger RNA and microRNA profiling during early mouse EB formation

Rashmi Tripathi, Harpreet Kaur Saini, Roland Rad, Cei Abreu-Goodger, Stijn van Dongen, Anton J. Enright

Journal:

Gene Expression Patterns

Year:

2011

Language:

english

File:

PDF, 872 KB

english, 2011

39

RNA-mediated communication between helminths and their hosts: The missing links

Claycomb, Julie, Abreu-Goodger, Cei, Buck, Amy H.

Journal:

Year:

2017

Language:

english

File:

PDF, 394 KB

english, 2017

40

Arabidopsis thaliana miRNAs promote embryo pattern formation beginning in the zygote

Armenta-Medina, Alma, Lepe-Soltero, Daniel, Xiang, Daoquan, Datla, Raju, Abreu-Goodger, Cei, Gillmor, C. Stewart

Journal:

Developmental Biology

Year:

2017

Language:

english

File:

PDF, 1.43 MB

english, 2017

41

An ENU-induced mutation of miR-96 associated with progressive hearing loss in mice

Lewis, Morag A, Quint, Elizabeth, Glazier, Anne M, Fuchs, Helmut, De Angelis, Martin Hrabé, Langford, Cordelia, van Dongen, Stijn, Abreu-Goodger, Cei, Piipari, Matias, Redshaw, Nick

Journal:

Nature Genetics

Year:

2009

Language:

english

File:

PDF, 655 KB

english, 2009

42

Detecting microRNA binding and siRNA off-target effects from expression data

Abreu-Goodger, Cei, van Dongen, Stijn, Enright, Anton J

Journal:

Year:

2008

Language:

english

File:

PDF, 1024 KB

english, 2008

43

RibEx: a web server for locating riboswitches and other conserved bacterial regulatory elements

Abreu-Goodger, C., Merino, E.

Journal:

Nucleic Acids Research

Year:

2005

Language:

english

File:

PDF, 375 KB

english, 2005

44

Combined agonist-antagonist genome-wide functional screening identifies broadly active antiviral microRNAs

Santhakumar, D., Forster, T., Laqtom, N. N., Fragkoudis, R., Dickinson, P., Abreu-Goodger, C., Manakov, S. A., Choudhury, N. R., Griffiths, S. J., Vermeulen, A., Enright, A. J., Dutia, B., Kohl, A., G

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 797 KB

english, 2010

45

Danger signals activate a putative innate immune system during regeneration in a filamentous fungus

Medina-Castellanos, Elizabeth, Villalobos-Escobedo, José Manuel, Riquelme, Meritxell, Read, Nick D., Abreu-Goodger, Cei, Herrera-Estrella, Alfredo, Aboobaker, A. Aziz

Journal:

Year:

2018

Language:

english

File:

PDF, 11.25 MB

english, 2018

46

Highlights of the mini-symposium on extracellular vesicles in inter-organismal communication, held in Munich, Germany, August 2018

Bielska, E., Birch, P.R.J., Buck, A.H., Abreu-Goodger, C., Innes, R.W., Jin, H., Pfaffl, M.W., Robatzek, S., Regev-Rudzki, N., Tisserant, C., Wang, S., Weiberg, A.

Journal:

Journal of Extracellular Vesicles

Year:

2019

Language:

english

File:

PDF, 1.74 MB

english, 2019

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